PyMICE: APython library for analysis of IntelliCage dataReport as inadecuate




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Behavior Research Methods

pp 1–12

First Online: 22 June 2017DOI: 10.3758-s13428-017-0907-5

Cite this article as: Dzik, J.M., Puścian, A., Mijakowska, Z. et al. Behav Res 2017. doi:10.3758-s13428-017-0907-5

Abstract

IntelliCage is an automated system for recording the behavior of a group of mice housed together. It produces rich, detailed behavioral data calling for new methods and software for their analysis. Here we present PyMICE, a free and open-source library for analysis of IntelliCage data in the Python programming language. We describe the design and demonstrate the use of the library through a series of examples. PyMICE provides easy and intuitive access to IntelliCage data, and thus facilitates the possibility of using numerous other Python scientific libraries to form a complete data analysis workflow.

KeywordsPython Library Mice Behavior Analysis IntelliCage 



Author: Jakub M. Dzik - Alicja Puścian - Zofia Mijakowska - Kasia Radwanska - Szymon Łęski

Source: https://link.springer.com/







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