The genome of the cotton bacterial blight pathogen Xanthomonas citri pv. malvacearum strain MSCT1Report as inadecuate




The genome of the cotton bacterial blight pathogen Xanthomonas citri pv. malvacearum strain MSCT1 - Download this document for free, or read online. Document in PDF available to download.

Standards in Genomic Sciences

, 12:42

First Online: 24 July 2017Received: 22 February 2017Accepted: 12 July 2017

Abstract

Xanthomonas citri pv. malvacearum is a major pathogen of cotton, Gossypium hirsutum L

In this study we report the complete genome of the X. citri pv. malvacearum strain MSCT1 assembled from long read DNA sequencing technology. The MSCT1 genome is the first X. citri pv. malvacearum genome with complete coding regions for X. citri pv. malvacearum transcriptional activator-like effectors. In addition functional and structural annotations are presented in this study that will provide a foundation for future pathogenesis studies with MSCT1.

KeywordsXanthomonas citri pv. malvacearum Bacterial blight TAL effectors Cotton Long read DNA sequencing AbbreviationsDTDDNA target domain

HVSHighly virulent strain

MLSTMultilocus sequence typing

PIPPlant inducible promoter

TALTranscription activator-like

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Author: Kurt C. Showmaker - Mark A. ArickII - Chuan-Yu Hsu - Brigitte E. Martin - Xiaoqiang Wang - Jiayuan Jia - Martin J. Wubb

Source: https://link.springer.com/



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